PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146272.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family DBB
Protein Properties Length: 199aa    MW: 21703.6 Da    PI: 4.9835
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box26.31.5e-08343438
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                     +C+ ++ +e++ fC +++  lC+ C  + H+       H+
  XP_022146272.1  3 IRCDVCDIEEASVFCPSDEAALCAACDRQVHRAnklagkHS 43
                    58******99*********************7666666665 PP
2zf-B_box27.75.8e-095895439
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39
                    + C+ ++  ++ lfC++++  lC +C   +H+   Ht+
  XP_022146272.1 58 PPCDICQLRRAVLFCKEDRAILCSECDIPIHEAneHTR 95
                    68*****999*********************6677875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MKIRCDVCDI EEASVFCPSD EAALCAACDR QVHRANKLAG KHSRFSLIPF ADAAELPPPC  60
DICQLRRAVL FCKEDRAILC SECDIPIHEA NEHTRNHGRF LLTGVKILPA TASSTGAGRV  120
EGAAIDAEKI GFSRASRKRA KIGSNGLLRD PLMEEFQPSI GNLEFEESGI SDGVSFSKSS  180
ISEYLESLPG WCVEEFLDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.11e-54DBB family protein