PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146367.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 288aa MW: 32140.4 Da PI: 9.4368

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.3	1.5e-06	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_022146367.1 59 YVCEICNQGFQREQNLQMHRRRH 81 9*********************9 PP
2	zf-C2H2	16	3.4e-05	140	162	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_022146367.1 140 WVCHKCSKAYAVHSDFKAHLKTC 162 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MLKGCCGSGG GDQEAAFLGS NSENNGVTSK RKRRPAGTPD PDAEVVSLSP KTLLESDRYV 60 CEICNQGFQR EQNLQMHRRR HKVPWKLLKR PAAEAAEAAR KKVFVCPEPS CLHHDPCHAL 120 GDLVGIKKHF RRKHSNQKQW VCHKCSKAYA VHSDFKAHLK TCGTRGHSCD CGRVFSRVES 180 FIEHQDACNL RQVRSDGQLQ APPLPPPNYY SRSISCGGAS TSSNDHHYNR FNMNSTTPLR 240 GFPILSNPDR NININLPDHH DLELHLSSPS SAFLKLSIVS RGTKNLRC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	35	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-107	C2H2 family protein