PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146460.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 250aa    MW: 27248.1 Da    PI: 6.8812
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002791113123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_022146460.1  91 FSCNYCRRKFYSSQALGGHQNAH 113
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
METLNFNLEA AKDSEASSSQ EDNPDHSNTA TTTSSSCPPS SSKAVVADTT PISLDLTLRF  60
NSTDAELNGD IEIHGETSSN KPSSATMPRV FSCNYCRRKF YSSQALGGHQ NAHKRERTMA  120
KRVTRMGMFF DRYRSLASLP LHGSALRSLG IEAHGAFHQA VLTSDQRPYN PGRSVGAKFE  180
QSSFGFPTFV EEYDDDVVGF WPGSFKQVAA KVDSSLGPMK TTTQSSNSEF GKTMPPPRTE  240
ASSPDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-37C2H2 family protein