PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146463.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family BBR-BPC
Protein Properties Length: 277aa    MW: 31003.6 Da    PI: 10.3763
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind321.33e-9812771301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     md d+ + rn+gyyep+  lk +lgl+lms+iaerd k     r++ + +++ ++a+++rd          ++  rd ++++        ++k+l
  XP_022146463.1   1 MDGDALNMRNWGYYEPS--LKAHLGLHLMSTIAERDVKHflpgRDQSA-IINMNGAFHSRDsavseapvtANW-ARDGWMSQ--------RDKFL 83 
                     99999988*******99..*******************9999777766.************666666663333.56666666........899** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+ +         +++vl +t+ ++ l++     l+++ +   e+        +e+++++ke+k++kkrq++  p+++k +k++k      k+
  XP_022146463.1  84 NMLPPNP--------TYSVLTETSAAQPLEM-----LQPPDTSRDEMV----CR-VEEPPVKKEAKQSKKRQNGGAPRTPKPRKPRK-----PKN 155
                     ***9544........589999******9999.....555554433333....33.345789999999999*************9999.....345 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     v+++   +++ka+kk++dlv+ng ++D+s++P+PvCsCtG+++qCY+WG GGWqSaCCttt+S++PLP+s krrgaRiagrKmSqgafkk+LekL
  XP_022146463.1 156 VDPSV--QQVKAPKKKMDLVINGLDMDISGIPIPVCSCTGSPHQCYRWGYGGWQSACCTTTLSIHPLPMSEKRRGARIAGRKMSQGAFKKVLEKL 248
                     66666..579************************************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aa+Gy++snp+DL++hWA+HGtnkfvtir
  XP_022146463.1 249 AAQGYNFSNPIDLRSHWARHGTNKFVTIR 277
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDGDALNMRN WGYYEPSLKA HLGLHLMSTI AERDVKHFLP GRDQSAIINM NGAFHSRDSA  60
VSEAPVTANW ARDGWMSQRD KFLNMLPPNP TYSVLTETSA AQPLEMLQPP DTSRDEMVCR  120
VEEPPVKKEA KQSKKRQNGG APRTPKPRKP RKPKNVDPSV QQVKAPKKKM DLVINGLDMD  180
ISGIPIPVCS CTGSPHQCYR WGYGGWQSAC CTTTLSIHPL PMSEKRRGAR IAGRKMSQGA  240
FKKVLEKLAA QGYNFSNPID LRSHWARHGT NKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.14e-97BBR-BPC family protein