PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146652.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family TCP
Protein Properties Length: 449aa    MW: 48702.4 Da    PI: 7.2575
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP114.11.9e-35812312135
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssaseceaes 77 
                      g+kdrhsk+ T++g+RdRRvRls+ +a++f+dLqd+LGf ++sk++eWL+++a  ai el+++                   +           
  XP_022146652.1  81 SGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIKAAADAIAELPSLdtsfpetpkqlsgendisvT----------- 164
                     689*************************************************************77666555544443322221........... PP

             TCP  78 ssssas........nsssg.....kaaksaakskksqksaasalnlak....esrakarararertrekmriknk 135
                          +        +   +      + +++a s++s++s+ s l+l++      r kar+ra+er ++++ ++++
  XP_022146652.1 165 -----EpvpfdsaeQ---NqsqlhVSLSKSAWSSNSETSKGSGLSLSRtevrVNRLKARERAKERAQKEKEKEQQ 231
                     .....0122111111...011222223333334444444444455554322367799999999966666555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MEVVDNIQEQ PRKFSRLANG RSSDPNKIGL KGVENIGPED GEDTESKRVV GGSGAGGGAD  60
DDANRLRGWH HSRIIRVSRA SGGKDRHSKV WTSKGLRDRR VRLSVATAIQ FYDLQDRLGF  120
EQPSKAVEWL IKAAADAIAE LPSLDTSFPE TPKQLSGEND ISVTEPVPFD SAEQNQSQLH  180
VSLSKSAWSS NSETSKGSGL SLSRTEVRVN RLKARERAKE RAQKEKEKEQ QDSSRIADHN  240
NLNSMTQNSS FTELLAGGAA TVATHRDAGV AEERQWLSST VPFDYFSSGI LQPSTSRTHH  300
SSGFSEQINL GTSLPQTMSS APFSVSAGDN NAEPLHHFSF VHDGNIVPVA TTQPAGGGDN  360
NLNFTISSNI PGYYRGTLQS NSSSLLPHLQ RFSPVDGSNL PFFFGAAASA APPLENQHHY  420
QFSPAFDGRL QLCYGSGSRQ SEQKGKGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.12e-67TCP family protein