PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022146674.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 224aa    MW: 24995.1 Da    PI: 7.1467
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022146674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF62.74.2e-201664149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+ien+  r +tfskRr gi KKA+EL +LC+aev v++fs+ gk + +
  XP_022146674.1 16 KKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 64
                    68******************************************97776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEGKKQTKGR QKIEMKKIEN EDDRLITFSK RRSGIYKKAS ELATLCGAEV GVVVFSPAGK  60
PFSFAHPSIE SVANKFINET PQPNDNTHPL VEAHRRVRIN ELNQQHNQLL SQLEAEKEKG  120
KALEKMKKVR GNSNGRGWWE TPTEEMGMEE LQQVDASLGD LYTNVCHQLR ERGVIGSSSS  180
SYSSMPFNGA GEETIPFNIL ANGPPPPTNA YLPHAFDYGQ DQLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04100.11e-35M-type_MADS family protein