PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022146822.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

LBD

Protein Properties

Length: 194aa MW: 21265.2 Da PI: 8.323

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022146822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	56.1	1e-17	50	103	47	100
DUF260 47 kalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 k++ e++r da++slvyeA++r+rdPvyG++g i++lq+q++ l++el+++++e XP_022146822.1 50 KEVAENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQVELNAVRAE 103 67899*********************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MRGLQAFEKK VCPRMPLLPI LLPPRTSQVC LRAQGLRCQQ RLQDAHGNGK EVAENQRADA 60 ANSLVYEANV RLRDPVYGCM GAISALQHQI QALQVELNAV RAEILRYKYR EANIIHSSPQ 120 HVPFLSSSAE VVSIAVPPPP PLLPPPPHYD GSASSSSSLY NRPAVAVAAD YSTISSDENV 180 PYFVRTSTTH QLDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30340.1	1e-30	LBD family protein