PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147058.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 477aa MW: 52474.6 Da PI: 9.5749

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147058.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.5	5.6e-24	141	185	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++ +k+CErH+hrgr+rsrk++e+ XP_022147058.1 141 DPEPGRCRRTDGKKWRCSRNTVPHQKYCERHMHRGRQRSRKPVEA 185 79****************************************997 PP
2	WRC	61.9	9.6e-20	360	399	2	41
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 epgrCrRtDGKkWRC+r+v++++k+C H+hrg+++ +k XP_022147058.1 360 LEPGRCRRTDGKKWRCRRNVIPNQKYCGLHMHRGSKKHSK 399 59********************************887766 PP
3	QLQ	35.3	3.6e-13	80	114	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +T Ql++L +Q+l+ K+L+a++ vP +Ll +i+k XP_022147058.1 80 LTVGQLHELQQQVLIHKHLVAGLRVPTHLLIPIWK 114 6777*****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MEVHPLQSIY SSETVRVATP LKAGEAAMTV TTMEVKMESR WPENDELSAP INLGLQIGTN 60 SAGNQSERTS IVHRRTESLL TVGQLHELQQ QVLIHKHLVA GLRVPTHLLI PIWKSVVRNL 120 GSNINVIGFS HLGIDYRSMM DPEPGRCRRT DGKKWRCSRN TVPHQKYCER HMHRGRQRSR 180 KPVEASENDS PSKRILLNNP DEVVRCTVVA PASTICGNNK TKNTFPPIES VVPGPETVAE 240 TITSSTHAAT AILTSCADAT RTIRMVPASA PNTIATHITA VPCSNPTAVT SIPTSYMIES 300 KDVYNISCRE NFSRSRNIFG RSDTNVQKIP PPSLGFSPNS VLQVPGCSSS YCDSKINLEL 360 EPGRCRRTDG KKWRCRRNVI PNQKYCGLHM HRGSKKHSKV AQNETVLSLS AATTGTLLPS 420 ATMLLTKPDP ATPNTNLSMS IQAGDKRRHD EERSNVSSSS ETTISDTTIT AYESISP

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MEVHPLQSIY SSETVRVATP LKAGEAAMTV TTMEVKMESR WPENDELSAP INLGLQIGTN  60
SAGNQSERTS IVHRRTESLL TVGQLHELQQ QVLIHKHLVA GLRVPTHLLI PIWKSVVRNL  120
GSNINVIGFS HLGIDYRSMM DPEPGRCRRT DGKKWRCSRN TVPHQKYCER HMHRGRQRSR  180
KPVEASENDS PSKRILLNNP DEVVRCTVVA PASTICGNNK TKNTFPPIES VVPGPETVAE  240
TITSSTHAAT AILTSCADAT RTIRMVPASA PNTIATHITA VPCSNPTAVT SIPTSYMIES  300
KDVYNISCRE NFSRSRNIFG RSDTNVQKIP PPSLGFSPNS VLQVPGCSSS YCDSKINLEL  360
EPGRCRRTDG KKWRCRRNVI PNQKYCGLHM HRGSKKHSKV AQNETVLSLS AATTGTLLPS  420
ATMLLTKPDP ATPNTNLSMS IQAGDKRRHD EERSNVSSSS ETTISDTTIT AYESISP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	5e-31	GRF family protein