PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147059.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

GRF

Protein Properties

Length: 475aa MW: 52262.3 Da PI: 9.5749

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.5	5.6e-24	139	183	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++ +k+CErH+hrgr+rsrk++e+ XP_022147059.1 139 DPEPGRCRRTDGKKWRCSRNTVPHQKYCERHMHRGRQRSRKPVEA 183 79****************************************997 PP
2	WRC	62	9.5e-20	358	397	2	41
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 epgrCrRtDGKkWRC+r+v++++k+C H+hrg+++ +k XP_022147059.1 358 LEPGRCRRTDGKKWRCRRNVIPNQKYCGLHMHRGSKKHSK 397 59********************************887766 PP
3	QLQ	35.3	3.6e-13	80	114	3	37
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +T Ql++L +Q+l+ K+L+a++ vP +Ll +i+k XP_022147059.1 80 LTVGQLHELQQQVLIHKHLVAGLRVPTHLLIPIWK 114 6777*****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MEVHPLQSIY SSETVRVATP LKAGEAAMTV TTMEVKMESR WPENDELSAP INLGLQIGTN 60 SAGNQSERTS IVHRRTESLL TVGQLHELQQ QVLIHKHLVA GLRVPTHLLI PIWKSVVRNL 120 GSNINGFSHL GIDYRSMMDP EPGRCRRTDG KKWRCSRNTV PHQKYCERHM HRGRQRSRKP 180 VEASENDSPS KRILLNNPDE VVRCTVVAPA STICGNNKTK NTFPPIESVV PGPETVAETI 240 TSSTHAATAI LTSCADATRT IRMVPASAPN TIATHITAVP CSNPTAVTSI PTSYMIESKD 300 VYNISCRENF SRSRNIFGRS DTNVQKIPPP SLGFSPNSVL QVPGCSSSYC DSKINLELEP 360 GRCRRTDGKK WRCRRNVIPN QKYCGLHMHR GSKKHSKVAQ NETVLSLSAA TTGTLLPSAT 420 MLLTKPDPAT PNTNLSMSIQ AGDKRRHDEE RSNVSSSSET TISDTTITAY ESISP

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MEVHPLQSIY SSETVRVATP LKAGEAAMTV TTMEVKMESR WPENDELSAP INLGLQIGTN  60
SAGNQSERTS IVHRRTESLL TVGQLHELQQ QVLIHKHLVA GLRVPTHLLI PIWKSVVRNL  120
GSNINGFSHL GIDYRSMMDP EPGRCRRTDG KKWRCSRNTV PHQKYCERHM HRGRQRSRKP  180
VEASENDSPS KRILLNNPDE VVRCTVVAPA STICGNNKTK NTFPPIESVV PGPETVAETI  240
TSSTHAATAI LTSCADATRT IRMVPASAPN TIATHITAVP CSNPTAVTSI PTSYMIESKD  300
VYNISCRENF SRSRNIFGRS DTNVQKIPPP SLGFSPNSVL QVPGCSSSYC DSKINLELEP  360
GRCRRTDGKK WRCRRNVIPN QKYCGLHMHR GSKKHSKVAQ NETVLSLSAA TTGTLLPSAT  420
MLLTKPDPAT PNTNLSMSIQ AGDKRRHDEE RSNVSSSSET TISDTTITAY ESISP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	1e-30	GRF family protein