PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147090.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 226aa    MW: 24153.8 Da    PI: 8.9779
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260122.13e-3820119199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC ++C++apyf +eq +++fa+vhk+FGasnv+kll ++pe++r da+ +++yeA+ar+r+Pv G+v++i++lq+q ++l+ael
  XP_022147090.1  20 PCGACKFLRRKCLPGCIFAPYFDSEQgTAHFAAVHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAEL 114
                     7***********************9989******************************************************************* PP

          DUF260  95 allke 99 
                     ++l++
  XP_022147090.1 115 SYLQA 119
                     99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSTGRSGGSC TGGNGGGSGP CGACKFLRRK CLPGCIFAPY FDSEQGTAHF AAVHKVFGAS  60
NVSKLLLHIP EHKRLDAAIT ICYEAQARVR EPVLGCVAHI FALQEQAARL RAELSYLQAY  120
LAASELRRPQ SNLQAQPPPL IKPSLPSISN LPLDSPSLPV SSDLSLLLDP VVQASGSKPQ  180
SPFESCQIGS NNFPSMAGRD QRLIYKQLSS MQCIGASLFP YLPKRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.19e-59LBD family protein