PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147238.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 233aa    MW: 26850.8 Da    PI: 5.2897
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.81e-192679356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +R++f++eq++ Le+ Fe+++ +  +++ +LA +lgL  rqV +WFqN+Ra++k
  XP_022147238.1 26 NRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWK 79
                    699**************************************************9 PP
2HD-ZIP_I/II1185.2e-3826116292
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ++rr+s+eq+k+LE+ Fe+e++Lep++K +la eLgl+prqva+WFqn+RAR+k+kqlE+dy+ L+++y++l+++ e+L+ke+++L+ + +
  XP_022147238.1  26 NRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYTLLRANYNNLASRFEALKKEKQALNIQFQ 116
                     589***********************************************************************************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MLNDEAEYSP PASMAEALAT RKKSMNRRRF SEEQIKSLES IFESESRLEP RKKLQLAGEL  60
GLHPRQVAIW FQNKRARWKS KQLERDYTLL RANYNNLASR FEALKKEKQA LNIQFQKLND  120
LVQRSMEETE SCRGGLSVET IDGKSENGHR VKYESEVKPS VSAEELEKSE HELEVLSNYG  180
SGIKEDYIGL EEPQLREPAQ GSLTSSTPNW NNLDSEGLFS QSNTSGQWWD FWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.13e-59HD-ZIP family protein