PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147285.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 528aa MW: 62065.3 Da PI: 8.5654

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.9e-07	320	361	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE el + + ++G++ Wk a +g + + ++k+ w+ XP_022147285.1 320 KRKWTPEEYELVRKFHDKHGSD-WKVLADALG--KHRFHVKDTWR 361 579*****************.******9..56777877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MLRRKQRNRV ADRVWWYLHS LVMATLELFA QDEDKDVTPA EMKMHKMTKT KCRDGSDKRD 60 DGEKKKEKKE KKKKKRKEHK IRKDDHKEEI ESETEHCVKK DEEKEEIEPE TEPCVEKDEE 120 MQMQEKKNDN LSEGLHRKSH KRGTDSGKEK KKKKKQKVED SRESSCLPIN KEKKRKKTKF 180 VEDGSPEKVH EGGAGLRENG DIASPSKRLS PKGSSKKVSF SDDVEIFPLV DGQSSEKTKQ 240 DDGLIRGKRF SKEEDEMVKK AVLEYIEEHG LGDEGLKKVL HCREFPEVKN CWKDIGKALS 300 WRPYLSVYYR AHILFERDDK RKWTPEEYEL VRKFHDKHGS DWKVLADALG KHRFHVKDTW 360 RRIKLPNMKK GHWTQDEYQK LFDLVNTDLR LKAFEEKKSK HGMLRDNICW GAISDKLSTR 420 STALCCQKWY RQLTSPMVAE DEWADVDDYH LIDALSSLDA CSIEDVEWDQ LLDHRNGDIC 480 RKRWSQMVKH IGESANKSFS EQVEVLSKRY SIDVLDAREA YDSAPIVD

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MLRRKQRNRV ADRVWWYLHS LVMATLELFA QDEDKDVTPA EMKMHKMTKT KCRDGSDKRD  60
DGEKKKEKKE KKKKKRKEHK IRKDDHKEEI ESETEHCVKK DEEKEEIEPE TEPCVEKDEE  120
MQMQEKKNDN LSEGLHRKSH KRGTDSGKEK KKKKKQKVED SRESSCLPIN KEKKRKKTKF  180
VEDGSPEKVH EGGAGLRENG DIASPSKRLS PKGSSKKVSF SDDVEIFPLV DGQSSEKTKQ  240
DDGLIRGKRF SKEEDEMVKK AVLEYIEEHG LGDEGLKKVL HCREFPEVKN CWKDIGKALS  300
WRPYLSVYYR AHILFERDDK RKWTPEEYEL VRKFHDKHGS DWKVLADALG KHRFHVKDTW  360
RRIKLPNMKK GHWTQDEYQK LFDLVNTDLR LKAFEEKKSK HGMLRDNICW GAISDKLSTR  420
STALCCQKWY RQLTSPMVAE DEWADVDDYH LIDALSSLDA CSIEDVEWDQ LLDHRNGDIC  480
RKRWSQMVKH IGESANKSFS EQVEVLSKRY SIDVLDAREA YDSAPIVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	76	KKEKKKKKR
2	71	77	KKKKKRK
3	72	77	KKKKRK
4	150	177	KKKKKKQKVEDSRESSCLPINKEKKRKK
5	150	179	KKKKKKQKVEDSRESSCLPINKEKKRKKTK
6	151	178	KKKKKKQKVEDSRESSCLPINKEKKRKK
7	151	180	KKKKKKQKVEDSRESSCLPINKEKKRKKTK
8	152	179	KKKKKKQKVEDSRESSCLPINKEKKRKK
9	152	181	KKKKKKQKVEDSRESSCLPINKEKKRKKTK
10	173	177	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-132	MYB_related family protein