PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147298.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 330aa MW: 36865.3 Da PI: 6.0018

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147298.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.6	1.8e-15	40	88	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEdell++++k+ g+ +W++ ++ g+ R++k+c++rw +yl XP_022147298.1 40 KGPWTSEEDELLINYIKKNNGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 88 79**************98888******99**********97 PP
2	Myb_DNA-binding	50.5	4.8e-16	94	139	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++TteE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_022147298.1 94 RGPFTTEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 139 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MGGSGFFSLA LVTGGGVSAS GTERCEMGRT PCCDKKGLKK GPWTSEEDEL LINYIKKNNG 60 HGSWRSLPKL AGLLRCGKSC RLRWTNYLRP DIKRGPFTTE EEKLVIQLHG ILGNRWAAIA 120 SQLPGRTDNE IKNLWNTHLK KRLICIGIDP QTHEPFSSRC SSSTAPASPA TRHMAQWESA 180 RLEAEARLSR ESSLFTPLPM ERTTDSDFFL QIWNSEVGDS FRRCTREDKT TCQSQSPISS 240 SMKCESVFVV STDNGLDYTG SSAMESNENE ETEYKNFKSM ASILMSKSDS SSANEFEESS 300 DSALELLLDF PINNDMSFLE ENNIKTQHQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-112	MYB family protein