PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147398.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 222aa MW: 25394.9 Da PI: 9.6418

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.1	3.2e-30	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+ii+ss+gklye++s XP_022147398.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFAS 59 8***********************************************86 PP
2	K-box	75.4	1.6e-25	83	171	9	97
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + +++ ++ q+e+a L keie+L+ ++R+llGe+L+s s +eL+q+eqqLe+sl+++R++K+++++eqie+l +kek l en +L +k XP_022147398.1 83 VRQHTLQTVQHEAATLVKEIESLEVSKRKLLGEGLGSSSCEELHQIEQQLERSLTNVRARKHQVYREQIEQLGEKEKFLAAENAKLGEK 171 6677899******************************************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIYSS RGKLYEFASS 60 SMQATVGRYL RHTKETHHLQ PLVRQHTLQT VQHEAATLVK EIESLEVSKR KLLGEGLGSS 120 SCEELHQIEQ QLERSLTNVR ARKHQVYREQ IEQLGEKEKF LAAENAKLGE KYCVQLHHRQ 180 SPNEQGEVSP HPESSSISDV ETELFIGPPE SRSLKRRLPL QT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	8e-85	MIKC_MADS family protein