PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147399.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25129.6 Da    PI: 9.6417
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.13.1e-301059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrng+lKKA+ELSvLCdaeva+ii+ss+gklye++s
  XP_022147399.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIYSSRGKLYEFAS 59
                    8***********************************************86 PP
2K-box64.24.7e-2283169997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     + +++ ++ q+e+a L keie+L+ ++R+llGe+L+s s +eL+q+eqqLe+sl+++R++K  +++eqie+l +kek l  en +L +k
  XP_022147399.1  83 VRQHTLQTVQHEAATLVKEIESLEVSKRKLLGEGLGSSSCEELHQIEQQLERSLTNVRARK--VYREQIEQLGEKEKFLAAENAKLGEK 169
                     6677899*****************************************************8..89********************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIYSS RGKLYEFASS  60
SMQATVGRYL RHTKETHHLQ PLVRQHTLQT VQHEAATLVK EIESLEVSKR KLLGEGLGSS  120
SCEELHQIEQ QLERSLTNVR ARKVYREQIE QLGEKEKFLA AENAKLGEKY CVQLHHRQSP  180
NEQGEVSPHP ESSSISDVET ELFIGPPESR SLKRRLPLQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-82MIKC_MADS family protein