PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022147401.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 350aa MW: 39260.4 Da PI: 8.7902

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022147401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.1	2.6e-10	53	125	1	47
TSSS-HHHHHHHHHHHHHTTTT............................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg............................tWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a + +G + +Wk+I + +g +t q++s+ qky XP_022147401.1 53 RESWTEQEHDKFLEALQ-FGENsgkdekvseeefcflaspyfsvtyifdrDWKKIEAFVG-SKTVIQIRSHAQKY 125 789**********95.6666699*******************************.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MSRLRGIDSV PPQTASVRTI TPATSTSYCA TAFPVSEDVS KKIRKPYTIT KSRESWTEQE 60 HDKFLEALQF GENSGKDEKV SEEEFCFLAS PYFSVTYIFD RDWKKIEAFV GSKTVIQIRS 120 HAQKYFLKIQ KSGKSEHVPP PRPKKKASHP YPQKAPKNVT TRNPGTYQPI SSPFEQRYIY 180 IPDSTAGFGH PCPNANISSW SCSPVPTIDV TTQVPKDGVK LAGSTFASNC CYSSSNESTP 240 RTWKIGEISE QGDQSMRNRV MPDFAQVYSF IGSVFDPSVS GHLQRLRQMD PIDLETALLL 300 MQNLAINLLS PEFENHRRLI SSHDEDLKKA KSGSLYNSLC IVRSDNTIIA

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MSRLRGIDSV PPQTASVRTI TPATSTSYCA TAFPVSEDVS KKIRKPYTIT KSRESWTEQE  60
HDKFLEALQF GENSGKDEKV SEEEFCFLAS PYFSVTYIFD RDWKKIEAFV GSKTVIQIRS  120
HAQKYFLKIQ KSGKSEHVPP PRPKKKASHP YPQKAPKNVT TRNPGTYQPI SSPFEQRYIY  180
IPDSTAGFGH PCPNANISSW SCSPVPTIDV TTQVPKDGVK LAGSTFASNC CYSSSNESTP  240
RTWKIGEISE QGDQSMRNRV MPDFAQVYSF IGSVFDPSVS GHLQRLRQMD PIDLETALLL  300
MQNLAINLLS PEFENHRRLI SSHDEDLKKA KSGSLYNSLC IVRSDNTIIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52660.2	1e-87	MYB_related family protein