PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147981.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 137aa    MW: 14912.2 Da    PI: 8.3297
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260145.31.8e-45181181101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C++dCv+ pyfpa+qp+kf +vhk+FGasnv+kll+++ ee+r+da+ss+vyeA+ar++dPvyG+vg+i++lq+q+e l+++la
  XP_022147981.1  18 PCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSIVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLA 112
                     7********************************************************************************************** PP

          DUF260  96 llkeel 101
                      ++++l
  XP_022147981.1 113 ITQAQL 118
                     *99885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MATEVNMGGS CKKSAPSPCA ACKLLRRRCS QDCVFGPYFP ADQPHKFSCV HKVFGASNVS  60
KLLQEVAEEQ RSDAVSSIVY EAKARIKDPV YGCVGTISSL QRQVEALQEQ LAITQAQLLH  120
LKMAQCPTPH NVNLCSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16530.13e-55LBD family protein