PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022147998.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 211aa    MW: 23501.5 Da    PI: 6.5595
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022147998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.1e-081966553
                    HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIks 53
                      ++E++RR+++++  ++L +llP+ +   +++  l+  e   +A++YIk+
  XP_022147998.1 19 RRIVEKNRRNEMKNLCSQLNSLLPNqD---SKQIsLTLPEQIDEAIKYIKE 66
                    6799*********************66...77778**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDRNFKLSAA SSSSSKVERR IVEKNRRNEM KNLCSQLNSL LPNQDSKQIS LTLPEQIDEA  60
IKYIKEAEKK VNAAKEKKER LMGKQSSTAA TMEGSSSSSP AAPQLKIQEI GRSLQIFLSS  120
GSDNQFLFRE TIRILQQEGA EVVSASFSAA ANSVLHTIHA QLGESMVEFG VAKVSERLKG  180
LVYGSGSDVE LQKEEQPWWE FEFPPDATWN F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-18bHLH family protein