PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022148257.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 288aa MW: 31345 Da PI: 5.5311

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022148257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.4	5.2e-08	205	246	8	54
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r+RR++i +++ L++l+P K++ a++L +A Y+k L XP_022148257.1 205 AARKRREKISEKIRVLQRLVPGG-----SKMDTASMLDEAASYLKFL 246 569****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MDDLLWNGSW SGGGDDXGCE ENLFISDPSC CSSPPLKELQ TVAEILGLPE INTSASDMGS 60 MALRKPAGVV DLKLLCDRGN SWPAGASSGG LLLEELENDK GRTAPESGSW DIFENPKPKQ 120 QNPISEKQPS SANYNGFQQP SNSSPSPSSS NNNDVEPAGR EAGMARMKAM MYHAAAFRPV 180 NLGLETVEKK RRRNVKTSKE PQTVAARKRR EKISEKIRVL QRLVPGGSKM DTASMLDEAA 240 SYLKFLREQV KAMEDLSYKL GSLDCLSNCT SFSFNSTSAF PTSAYFPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	210	KKRRRNVKTSKEPQTVAARKRR
2	189	212	KKRRRNVKTSKEPQTVAARKRREK
3	190	211	KKRRRNVKTSKEPQTVAARKRR
4	190	213	KKRRRNVKTSKEPQTVAARKRREK
5	191	212	KKRRRNVKTSKEPQTVAARKRR
6	207	212	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	8e-37	bHLH family protein