PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148320.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 264aa    MW: 30196.5 Da    PI: 6.3708
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.4e-18956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed +l+++v ++G ++W++Ia+  g++Rt+k+c++rw +yl
   XP_022148320.1  9 KGPWTEQEDIQLICYVGLFGDRRWDSIAKVSGLNRTGKSCRLRWVNYL 56
                     79********************************************97 PP
2Myb_DNA-binding53.17.5e-1762107148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ +E+ l +++++++G++ W++Iar+++ gRt++++k++w++++
   XP_022148320.1  62 RGKMSSQEERLVLELHAKWGNR-WSKIARKLP-GRTDNEIKNYWRTHM 107
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MVEGQEIRKG PWTEQEDIQL ICYVGLFGDR RWDSIAKVSG LNRTGKSCRL RWVNYLHPGL  60
KRGKMSSQEE RLVLELHAKW GNRWSKIARK LPGRTDNEIK NYWRTHMRKK AQEKRRALSA  120
SLSSSSSSSS SSSNNSAVEF PADTGPVKFF DSGGSEGSEV TALSTTKKKM EENQEQGDPN  180
GYSMDDIWKD IDLSDHESLI MNQDVYSEED CNFSCPALTS SSPWDYYCGD SLWRMEEEES  240
KLIFSGYDHN GRPRLAQANQ NFFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.12e-83MYB family protein