PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148471.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family LBD
Protein Properties Length: 157aa    MW: 17560.8 Da    PI: 6.8852
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260133.39.6e-4261051100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+C kdCv+apyfpa++p+kfa++hk+FGasnv+k+l++l e+ r da+sslvyeA +r+rdPvyG++g +++lq+ +++l+ +la
  XP_022148471.1   6 PCASCKLLRRRCGKDCVFAPYFPADDPHKFAILHKIFGASNVSKMLQKLLEDXRADAVSSLVYEASVRMRDPVYGCAGAVSHLQNAVSRLEMQLA 100
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022148471.1 101 TARAE 105
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MGGVSPCASC KLLRRRCGKD CVFAPYFPAD DPHKFAILHK IFGASNVSKM LQKLLEDXRA  60
DAVSSLVYEA SVRMRDPVYG CAGAVSHLQN AVSRLEMQLA TARAELLNFQ MQQQQTPTSS  120
QVVQQEVYHK LISFSNEDCC SSINIFEQVE DYNSLWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.14e-58LBD family protein