PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148478.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 309aa    MW: 34561.6 Da    PI: 9.6792
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-082772245
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      +WT+ E +l+ +a + + ++   +W+++a++++ g+t  +++  + 
   XP_022148478.1 27 SKWTAAENKLFENALAIHDTDtpdRWHKVAAMIP-GKTVGDVIRQYK 72
                     58********************************.****99998876 PP
2Myb_DNA-binding46.49.4e-15134178347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_022148478.1 134 PWTEDEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 178
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MKWEMEILSP PSLVSTMSWS SGDGKSSKWT AAENKLFENA LAIHDTDTPD RWHKVAAMIP  60
GKTVGDVIRQ YKELEADVSS IEAGLIPIPG YDTSQFTLDW VNSHSYDGFK QSYGLVGKRS  120
SGRSTDQERK KGVPWTEDEH KLFLMGLKKY GKGDWRNISR NFVVTRTPTQ VASHAQKYFI  180
RQLSGGKDKR RASIHDITTV NLNDTRSPSP DDKKSLSPEH AAVLPRQPNP SSTTTGHGNA  240
FNWNHQHHHH QHHNSSGAAI AFNHPNGNVF MSPTAFGVNS WLPEHHLQKD SVLVGRRHLE  300
MGQCGLLSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.12e-95MYB_related family protein