PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022148817.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

C2H2

Protein Properties

Length: 357aa MW: 40340.6 Da PI: 7.4418

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022148817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.3e-05	190	209	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022148817.1 190 FSCPLCFKTFNRYNNMQMHM 209 89*****************9 PP
2	zf-C2H2	15	7.1e-05	274	296	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_022148817.1 274 FSCRKCGKAFAVRGDWRTHEKNC 296 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MSDPSYSYSI NGSFGLYPLH NHHYFSSSSS SSSSSSSSYD HHFYSLSYSN NDHQTLKNSS 60 FFTPHQLFSP PNSSPQVLPL LSLSPARNVD QDHHQSSSSS MEISKQDHDE SSHVTVALHL 120 GLPTPPSDLI LRLSSTEISD KEEEEVEEEE EDEDQEEEAA PVVPNYSSSL NKGQYWIPTP 180 AQILIGPTQF SCPLCFKTFN RYNNMQMHMW GHGSQYRKGP QSLRGTQPTA MLRLPCYCCA 240 PGCRNNIDHP RSKALKDFRT LQTHYKRKHG MKPFSCRKCG KAFAVRGDWR THEKNCGKLW 300 HCTCGSDFKH KRSLKDHIKA FGHGHAAYGL ANANANATHS FHDHLDHRHH PPPFDTS

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MSDPSYSYSI NGSFGLYPLH NHHYFSSSSS SSSSSSSSYD HHFYSLSYSN NDHQTLKNSS  60
FFTPHQLFSP PNSSPQVLPL LSLSPARNVD QDHHQSSSSS MEISKQDHDE SSHVTVALHL  120
GLPTPPSDLI LRLSSTEISD KEEEEVEEEE EDEDQEEEAA PVVPNYSSSL NKGQYWIPTP  180
AQILIGPTQF SCPLCFKTFN RYNNMQMHMW GHGSQYRKGP QSLRGTQPTA MLRLPCYCCA  240
PGCRNNIDHP RSKALKDFRT LQTHYKRKHG MKPFSCRKCG KAFAVRGDWR THEKNCGKLW  300
HCTCGSDFKH KRSLKDHIKA FGHGHAAYGL ANANANATHS FHDHLDHRHH PPPFDTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-108	C2H2 family protein