PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022148879.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 236aa    MW: 25936.4 Da    PI: 8.8871
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022148879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643e-2084133255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  XP_022148879.1  84 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAIAYDNAALRFKG 133
                     7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MNELLGSYNN IIYPSSASWS QSQYSQSQSQ SQSQTIMNYS PNTPSHIAST TCFQDDAHHF  60
NLPQPQPQPQ PPPLHNQESG RKRHYRGVRQ RPWGKWAAEI RDPKKAARVW LGTFDTAEAA  120
AIAYDNAALR FKGTKAKLNF PERVQGNNTG AEFTGAAAPS SSVGVAIPPP LMPQEEAFPG  180
LHQYAQLLSS TDADFPYYSS TLLNHPYPSL FSSSSSSSSS SSFNQQNHFG TRGPTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.14e-35ERF family protein