PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149169.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 236aa MW: 26492.4 Da PI: 7.0087

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.5	7.4e-19	8	53	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell +v+++G ++W++I++ + gR++k+c++rw + XP_022149169.1 8 KGPWSPEEDELLRMLVQRHGARNWSAISQSIH-GRSGKSCRLRWCNQ 53 79****************************.*********985 PP
2	Myb_DNA-binding	57.6	2.9e-18	62	104	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde++v a++++G++ W+tIar ++ gRt++ +k++w++ XP_022149169.1 62 PFTAEEDEIIVGAHTRYGNK-WATIARLLN-GRTDNAIKNHWNST 104 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MVDVDRVKGP WSPEEDELLR MLVQRHGARN WSAISQSIHG RSGKSCRLRW CNQLSPGLEH 60 RPFTAEEDEI IVGAHTRYGN KWATIARLLN GRTDNAIKNH WNSTLKRKFS SISDYGGTAA 120 DEPPEKKTEC TSQGSTISVS NRCLSPSGSD TSDSTPSLNI EPSTQLTLSL PGTYSSPPRR 180 QQSISSPAEE KRPNFGPEFL SAMQEMIREE VRNYMAECKE REVCYGRNDE EFRNAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-66	MYB family protein