PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149185.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MIKC_MADS

Protein Properties

Length: 239aa MW: 27480.6 Da PI: 10.1021

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.4	3.8e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA ELS+LCdaev +iifsstgkly+yss XP_022149185.1 10 RIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSS 59 8***********************************************96 PP
2	K-box	87.2	3.2e-29	78	171	8	99
K-box 8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++ ++ + +++e+a Lk++++ Lq+ +R+l+Ge+L+ Ls+k+Lq+Le+qLe slk +R kK+++l+++i el++k +++++en +L kkl+ XP_022149185.1 78 QlmNSVSELQFWKREAATLKQQLQYLQECHRQLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKEKILTDEITELRQKGNQMHQENLELYKKLD 171 234678899*********************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KARELSILCD AEVGLIIFSS TGKLYDYSST 60 SIRSITERYN KVKEEQNQLM NSVSELQFWK REAATLKQQL QYLQECHRQL MGEELSGLSV 120 KDLQNLESQL EMSLKGVRVK KEKILTDEIT ELRQKGNQMH QENLELYKKL DMIRKENAEL 180 QMKAYGALEV NKTSSSSVHQ FTITNRYSTP GPVHLQLRQP QPQNNEAPIP GIKLGLQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14210.1	7e-93	MIKC_MADS family protein