PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149232.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 219aa    MW: 24398.5 Da    PI: 6.6911
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149232.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF79.71.9e-25959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n   rqvtfskRr g++KKA+EL +LCda++a+i+fs +gkl++ys+
  XP_022149232.1  9 KKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYST 59
                    689**********************************************96 PP
2K-box50.49.9e-18951722299
           K-box  22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     a L +e  +  +e+Rh+ Ge+L+ L ++eL+qLe+ Le +l+++ ++K+e +l++i   ++ke  l +en++Lr++++
  XP_022149232.1  95 AELAEEFATKTNELRHMRGEELQGLGIEELKQLEKLLEIGLSRVVETKDEKFLKEIGAIKEKEALLMKENQRLRNQMA 172
                     6677777777899*************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MTRQKIEIKK IDNIAARQVT FSKRRRGLFK KAHELATLCD ADIALIVFSA SGKLFDYSTS  60
STQELLRRQN MVPENNNFTQ PVAVASSQLG NSVHAELAEE FATKTNELRH MRGEELQGLG  120
IEELKQLEKL LEIGLSRVVE TKDEKFLKEI GAIKEKEALL MKENQRLRNQ MANLNGEQEQ  180
AVIGGHNNSL GSNTSNSSSS ANPNSQHYDS SDISLELGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-46MIKC_MADS family protein