PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149240.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 297aa    MW: 32757.4 Da    PI: 9.9127
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-10555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT +E+  l+ +v ++G g W+tI +          R+  ++k++w++
   XP_022149240.1  5 KQKWTSQEEAALKAGVVKHGAGKWRTILKDPEfsnvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGAPKQKWTS QEEAALKAGV VKHGAGKWRT ILKDPEFSNV LYLRSNVDLK DKWRNMSVMA  60
NGCGSREKTR LALKRQHTTK KDEIIVAQST AVQSEDELAD AKSVSLSSDI KQFSGPNRSN  120
VRFDNLIIEA ITTLREPGGS NKTAIASYIE DQYWAPPDFK RSLSTQLKYL IASGKLVKVK  180
RKYRLAPTVP LSERRNSMLL LEDQQRASIR ADKDEMCTLA KAQIDLELAK MRTMSSQEAA  240
AAAARAVAEA EAAIAEAEEA AREAEAAEAD AEAAQSFAEA AMKTLKGRNL PKMMIRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.17e-98MYB_related family protein