PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149290.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 365aa    MW: 39890.9 Da    PI: 4.5108
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-102873271055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_022149290.1 287 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVQYVKFLQ 327
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MESIGAISER EWISLSGTYT AEESDFMVNL LSNYCLPNEL NSGLSLEIPP SYWAANEPSP  60
ALAMAAMEEP SYYSSDASDS SNIYGLPQGN NNPYSLNDSH PLWFPNGASL SLDFSMEDVG  120
NDDSARLDDD NGSSQKTRQC RLQQSPTNSA VAAAINGKSS QPKRRTEVTA EEAMRDDEVA  180
PTISIDDNPK KRSPSLPDVE KTKRSVRSRK SPKLASGSSC NEEDHIVSPN GQSTSSFSSE  240
DDCNEPQEIN CGVTSSTNSK GSASLTSNGK PRASRGSATD PQSLYARKRR ERINERLRIL  300
QSLVPNGTKV DISTMLEEAV QYVKFLQLQI KLLSSDDLWM YAPIAYNGMD IGLNSKLMKQ  360
DNASQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-44bHLH family protein