PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149383.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 241aa MW: 26330.2 Da PI: 8.3529

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.6	7e-16	64	109	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq XP_022149383.1 64 HNQSERKRRDKINQRMKTLQKLVPNS-----NKTDKASMLDEVIEYLKQLQ 109 9**********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
TSQGSLENTS SGKPCVKTTT TTTDDHDSVC HSTPQGEEDD EADRKKENAK SSGSTKRSRA 60 AAIHNQSERK RRDKINQRMK TLQKLVPNSN KTDKASMLDE VIEYLKQLQA QVHMMSRMNM 120 SAMMLPMAMQ QLPMASLMAP MSLGMGMAGM GMDHLNMIAG RPGLTAGMSP LLHPSAFMPG 180 ASWDGATCDQ MQPSPTMMMA DPLSTFLACQ SQPMTVEAYN RIAMMFQQLH QHSPSTGGSK 240 I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	73	ERKRRD
2	69	74	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-52	bHLH family protein