PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149530.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 324aa    MW: 37527 Da    PI: 7.1094
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS143.12.9e-441252843161
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshl 96 
                     elLl+ A a+++++++++q++++ l+el sp+gd++q+la+yf++A+ +r+ +s++++y++l + +++++   e +   +l f+e+sP+++f+h+
  XP_022149530.1 125 ELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLVAVSEKRS-CFELTRRIELkFQEMSPWMTFGHV 218
                     79************************************************************87777643.44444444446************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleet 161
                     + N aI+ea+ege+++HiiD++ s ++QWp+Ll+aLa+R+ ++ p+l++T +  ++s+ + e +++
  XP_022149530.1 219 ASNGAIMEAFEGERKLHIIDISNSFCTQWPTLLEALATRSnAEIPHLKLTMLITAKSNTTLESQKV 284
                     ****************************************67789*****9999776644444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDALFFRQQQ LVSDVQSYSN STRNDVVVNS SSSFENSATD RDRNQNPYFL DQPTQECFSS  60
LSVTEDEDHD HFSAASSSNH YRHPPHPHTA TVSTTSIGTA TPTDQRFSHF IKDLNFKFSD  120
NWASELLLQT AIAITDNNTS RIQQFMWMLN ELGSPYGDTN QKLAFYFLQA MFSRVIDSGD  180
RCYRSLVAVS EKRSCFELTR RIELKFQEMS PWMTFGHVAS NGAIMEAFEG ERKLHIIDIS  240
NSFCTQWPTL LEALATRSNA EIPHLKLTML ITAKSNTTLE SQKVRNFTRS HKFSNKNLLS  300
QFYYVFYRQE IKEIKKKDRR EIFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.17e-66GRAS family protein