PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149531.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 318aa    MW: 36998.4 Da    PI: 7.1094
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS143.12.7e-441192783161
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshl 96 
                     elLl+ A a+++++++++q++++ l+el sp+gd++q+la+yf++A+ +r+ +s++++y++l + +++++   e +   +l f+e+sP+++f+h+
  XP_022149531.1 119 ELLLQTAIAITDNNTSRIQQFMWMLNELGSPYGDTNQKLAFYFLQAMFSRVIDSGDRCYRSLVAVSEKRS-CFELTRRIELkFQEMSPWMTFGHV 212
                     79************************************************************87777643.44444444446************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleet 161
                     + N aI+ea+ege+++HiiD++ s ++QWp+Ll+aLa+R+ ++ p+l++T +  ++s+ + e +++
  XP_022149531.1 213 ASNGAIMEAFEGERKLHIIDISNSFCTQWPTLLEALATRSnAEIPHLKLTMLITAKSNTTLESQKV 278
                     ****************************************67789*****9999776644444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDALFFRQQQ LVSDVQSYSN STRNDVVVNS SSSFENSATD RDRNQNPYFL DQPTQECFSS  60
LSVTEDEDHD HFSAASSSNH YRHPPHPHTA TVSTTSIDQR FSHFIKDLNF KFSDNWASEL  120
LLQTAIAITD NNTSRIQQFM WMLNELGSPY GDTNQKLAFY FLQAMFSRVI DSGDRCYRSL  180
VAVSEKRSCF ELTRRIELKF QEMSPWMTFG HVASNGAIME AFEGERKLHI IDISNSFCTQ  240
WPTLLEALAT RSNAEIPHLK LTMLITAKSN TTLESQKVRN FTRSHKFSNK NLLSQFYYVF  300
YRQEIKEIKK KDRREIFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.14e-66GRAS family protein