PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149592.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 234aa    MW: 26648 Da    PI: 9.2471
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.72.4e-31958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+
  XP_022149592.1  9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 58
                    79***********************************************8 PP
2K-box106.43.5e-3578173499
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     +sg s+eea+ + +qqe++kLk++i+++q+++Rh++Ge L+sLslk+L++Le +Le++++k+R+kKne l++++e +qk+e elq++n++Lr+++
  XP_022149592.1  78 NSGLSVEEANVQFYQQEASKLKRQIREIQNSNRHIVGEALSSLSLKDLKSLEGRLERGITKVRAKKNETLCAEMEFMQKREMELQNHNNYLRAQI 172
                     566679***************************************************************************************99 PP

           K-box  99 e 99 
                      
  XP_022149592.1 173 G 173
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFST RGRLYEYANN  60
SVRGTIERYK KAFADSSNSG LSVEEANVQF YQQEASKLKR QIREIQNSNR HIVGEALSSL  120
SLKDLKSLEG RLERGITKVR AKKNETLCAE MEFMQKREME LQNHNNYLRA QIGEHERIRQ  180
QQMQYESAAT QYDENENRGY GAAAAVAAAA VGLMDSDNNH YGHAQDHLTA LQLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.11e-95MIKC_MADS family protein