PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149610.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 261aa MW: 28819.8 Da PI: 8.7366

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.4e-12	69	115	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN + Lr+llP kK++Ka+ L +++ ++k L XP_022149610.1 69 KNHSEAERRRRARINGHLGSLRSLLPGG-----KKMDKATLLAEVISHLKVL 115 58**********************87.....8************9977 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MGHFSRIYSY TSCFQRPNDG LSANSAAMRN GSASTSALVL DCEKDELVEA PLKLESKGVP 60 AERSAAALKN HSEAERRRRA RINGHLGSLR SLLPGGKKMD KATLLAEVIS HLKVLKRAAA 120 EVSEVHIIPK EIDEITVEQQ EDGLDGVAYS IRASLCCDYK PGLLPDLRRA LHALDLIIKR 180 AEIATLNGRM KNVFVLTSCK EGSIETSELR RFLESSVHQA IQSVLNNFSD PQELSFMTFS 240 NKRRRVSVFN SSSSSSIGDF W

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	246	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-34	bHLH family protein