PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149724.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 318aa    MW: 36733.3 Da    PI: 6.7277
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.17.8e-35141042101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+ye+++d++++ ++sws++g sfvv+++ efak++Lp yFkh+nf+SFvRQLn+YgF+k+++e+         weF+++ F +g+++ll++
  XP_022149724.1  14 FLTKTYEMVDDPSTNAVVSWSQSGFSFVVWNPPEFAKELLPIYFKHNNFSSFVRQLNTYGFRKIDREQ---------WEFANEGFVRGRTHLLRT 99 
                     9***************************************************************9988.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_022149724.1 100 IHRRK 104
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDSSEVSSGA PPPFLTKTYE MVDDPSTNAV VSWSQSGFSF VVWNPPEFAK ELLPIYFKHN  60
NFSSFVRQLN TYGFRKIDRE QWEFANEGFV RGRTHLLRTI HRRKPIYSHS QNQSHSQNQG  120
QSHSQSSNGF PFSEPERQEL ENKIKILNQE NTQLQSQLQK HEREKEEIER QIQSLCNQLW  180
RMGNEQKQLI TMLTAQLQKQ HPSKKRRLWK LNDLLLEDPS EWEKEEKNGW KSVMIPPLEL  240
MGKLESSLGL CEELLCSVAK VVGEESKVVG EVKVVGSKEG DVRNGANDVF WEQFLTEIPG  300
SSNAGEVIYL NRRNNVVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.15e-51HSF family protein