PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149807.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 246aa    MW: 27488.9 Da    PI: 4.6147
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-125698754
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      Er+RR+++N+++  Lr ++P+      +K++Ka+i + A+eYI++L
  XP_022149807.1 56 LSERNRRKKLNDRLLALRAVVPNI-----TKMDKASIIKDAIEYIQKL 98
                    57*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MENIIDEYKY YWETNMFLHN EEFDGWPGLD EAFYGSYDSS SPDGTPSSLE ASKNILSERN  60
RRKKLNDRLL ALRAVVPNIT KMDKASIIKD AIEYIQKLRE QERRIESDIS DLESGKVKRT  120
PASDSGDDQI SAKKTADANR EPKGDSEGDA SSSSTIEILD LSVNYMAEKT IIVSLTCRRS  180
GDTILKLSQA IESLNLKIIT ANITVVAGRL LNTLFVEAER AEEEEVKVKV ETAIAAICDR  240
KSPMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.18e-55bHLH family protein