PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149820.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

LBD

Protein Properties

Length: 234aa MW: 25969.6 Da PI: 9.294

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145.4	1.6e-45	25	124	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql++l+ +l XP_022149820.1 25 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT 119 7*********************************************************************************************9 PP DUF260 96 llkee 100 +k+e XP_022149820.1 120 CAKSE 124 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MLEKSNRVFL QRRKLKMASS SSNSPCAACK FLRRKCQPEC VFAPYFPPDQ PQKFANVHKV 60 FGASNVTKLL NELHPHQRED AVNSLAYEAD MRLRDPVYGC VGVISLLQHQ LCKLQMDLTC 120 AKSELSKYQN LGIGNHAALI SPPSAAVATA HGPRSNQPAF NFVRDQPHSL YHDQIFPRDQ 180 QQQMMIRSGF DGGSNYDAGL LAVNVTPSIA NLGHQFQQPR AAAGVDRRGT LDHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	1e-79	LBD family protein