PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022149821.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

LBD

Protein Properties

Length: 218aa MW: 23941.1 Da PI: 8.299

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022149821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145.6	1.4e-45	9	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql++l+ +l XP_022149821.1 9 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT 103 7*********************************************************************************************9 PP DUF260 96 llkee 100 +k+e XP_022149821.1 104 CAKSE 108 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MASSSSNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELHPH 60 QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLCKLQM DLTCAKSELS KYQNLGIGNH 120 AALISPPSAA VATAHGPRSN QPAFNFVRDQ PHSLYHDQIF PRDQQQQMMI RSGFDGGSNY 180 DAGLLAVNVT PSIANLGHQF QQPRAAAGVD RRGTLDHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	1e-79	LBD family protein