PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022149998.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 191aa    MW: 22008.4 Da    PI: 6.7654
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022149998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF79.32.7e-25958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien   rqvtf+kRr+g+lKKA+ELSvLCdae+ + ifs +gklye +
  XP_022149998.1  9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELA 58
                    79*********************************************965 PP
2K-box46.12.1e-16851601187
           K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                     e+++ + ++e+++Lk+eie  q+ +R+  G + e ++l eL   e+qLe  + ++Rs+K+++++++ie l+++++e+
  XP_022149998.1  85 ENQTLEIKEEVNRLKQEIEV-QKGLRNAFGGGAEGMTLDELDMFEKQLEIWICQVRSTKMKFMCQEIEALKNQMEEN 160
                     6778899***********95.8899**********************************************988775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MARGKVQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFIFSA HGKLYELATK  60
GTMQGLIERY MNHTSRTQPP DPSIENQTLE IKEEVNRLKQ EIEVQKGLRN AFGGGAEGMT  120
LDELDMFEKQ LEIWICQVRS TKMKFMCQEI EALKNQMEEN IGYTTNIEAV NNNTNFQYPL  180
TIQDELFQLC T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.11e-63MIKC_MADS family protein