PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022150060.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HD-ZIP
Protein Properties Length: 203aa    MW: 23520.1 Da    PI: 8.9773
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022150060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.92e-1972126256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq + Le+ F++n++++ +++e LA+ l+L+ rqV vWFqNrRa+ k
  XP_022150060.1  72 RKKLRLTKEQSHLLEQTFRQNHTLNPKQKEALAEMLKLKPRQVEVWFQNRRARSK 126
                     78889************************************************98 PP
2HD-ZIP_I/II1154.6e-3772160189
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                     +kk+rl+keq++lLE++F+++++L+p++K++la+ L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++  l+e+n+rL+keveeLr+
  XP_022150060.1  72 RKKLRLTKEQSHLLEQTFRQNHTLNPKQKEALAEMLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGLLTEQNKRLQKEVEELRA 160
                     69*************************************************************************************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MKLIKLHQQA PMASSRLDLT ISVPGFDSFP SLPSSVRDLD MNRAPEEEEW MMGSMEEDEE  60
ISNNNNGGGH PRKKLRLTKE QSHLLEQTFR QNHTLNPKQK EALAEMLKLK PRQVEVWFQN  120
RRARSKLKQT EMECEYLKRW FGLLTEQNKR LQKEVEELRA MKAPPPTVIS PHSCEPLPAS  180
NLTMCPRCER VTTTALDKTR IVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121129RRARSKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01430.12e-72HD-ZIP family protein