PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022150089.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 265aa MW: 30484 Da PI: 5.4395

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022150089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.3	7.2e-20	61	114	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q++ Le+ Fe+++++ e++++LAkklgL+ rqV vW+qNrRa++k XP_022150089.1 61 KKRRLSHDQVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK 114 56689************************************************9 PP
2	HD-ZIP_I/II	128.5	2.9e-41	60	151	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrls++qv++LE+sFeee+kLeperK++la++LglqprqvavW+qnrRAR+k+kqlE+dy+ Lk++yd l ++ +++ ke++ L++e++ XP_022150089.1 60 EKKRRLSHDQVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQLERDYDLLKASYDLLLSNYDSIVKENAVLKSEVA 151 69**************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MESGRFLFNP PATHGQMLYL GGGGRRMMSM SMQESPKGRP FFRSPHDLYD DEYYDELYPE 60 KKRRLSHDQV QMLEKSFEEE NKLEPERKTQ LAKKLGLQPR QVAVWYQNRR ARWKMKQLER 120 DYDLLKASYD LLLSNYDSIV KENAVLKSEV ASLAEKFLNK ELTGEASVPH ITSEPLLANI 180 VHVSSPRSGR KAEDRLSSGS NSSAPVDDNC PQLIDSGDSY FPSNEYLQIE NDDKSDNGYN 240 FFSDMFAATN QQNQEGGHPA WWAWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	117	RRARWKMKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-79	HD-ZIP family protein