PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022150269.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family M-type_MADS
Protein Properties Length: 326aa    MW: 37758.7 Da    PI: 6.7889
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022150269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.34.7e-19952144
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                    k i+n+  r++tf kR++ ++ KA+ELS+LCd++ +v i+++++
  XP_022150269.1  9 KLISNEKSRKTTFLKRKKSLMRKAYELSTLCDIRTCVFIYGPNQ 52
                    569***************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGRGKLCMKL ISNEKSRKTT FLKRKKSLMR KAYELSTLCD IRTCVFIYGP NQNDRSPVEV  60
HTWPPSRDDV DDMIASYRAN CLHKRARKPF DLLDFFSERK KKIECDISKL HKDLAQARFP  120
KWDERLDYLL EDQLRVLMAE LDSKLDATKR RIEVAMEENL EEGTSSGSGQ ITVNANMKQE  180
QTMMFGSSIG VETQTHTNLI PYQNLQVQTM DHHELVDHNN LSQIQLNYGS FQSQNIYNNF  240
PTMTMEKSQN YYSMFNYGVP LPVPAYSVLP LPYMQLSDDQ VMMANASSNS HQMGLANNIN  300
AASSQLNNDH FDYVNYDQYF MNTNNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.12e-20M-type_MADS family protein