PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022150331.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

SBP

Protein Properties

Length: 216aa MW: 24257.7 Da PI: 7.6111

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022150331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	86.6	3.1e-27	1	53	26	78
HHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 26 vhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +hskap+v+v gleqrfCqqCsrfh sefD++krsCrrrLa+hnerrrk+++ XP_022150331.1 1 MHSKAPKVVVLGLEQRFCQQCSRFHVTSEFDDSKRSCRRRLAGHNERRRKSSH 53 6*************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MHSKAPKVVV LGLEQRFCQQ CSRFHVTSEF DDSKRSCRRR LAGHNERRRK SSHESVAPRN 60 CPQENKSTTG RYAYIPSPTG RALSLLSSKN DSWATSSELS LRSSAALREL IAENRAAILA 120 RQLILDRDWQ SNGHTAADEF GGGVAFHQAG AGGLYCEQQQ QQSWERMHEH GDGHVTLDLM 180 QAPSTAFGLL SVRGKYKEED EECXELWNSF HDSHVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	7e-24	SBP family protein