PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022150494.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TCP

Protein Properties

Length: 292aa MW: 33838.3 Da PI: 9.6696

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022150494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	136.3	2.6e-42	122	248	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97 + kdrhski+T++g+RdRR+Rls+e+a+ fFdLqd+LGfdk+skt+eWL++++ aikel + + +c ++++s ++++++ + ++ ++ XP_022150494.1 122 TTKDRHSKICTSKGPRDRRMRLSLEIARSFFDLQDMLGFDKASKTVEWLFTKSRSAIKELKEKYFAGLPNCCNDAKSC--DSKNNNLSVFEEVPR 214 68***********************************************************555555562222222..222333444555566 PP TCP 98 kksqksaasalnlakesrakarararertrekmrik 133 +k+++++ + ++kesr karararertrek ++ XP_022150494.1 215 EKKRRRKL--RIVDKESRCKARARARERTREKLILR 248 66666666..89999***************8665 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MLASSSNPIS SFPFMNQITT SSINDENQNP TFSTILEQQQ QHSPPSLQFI DCYNYSYNPF 60 LDEEFILLYY QKQQFHGTNP APDQEVGVES ERANNEAENI TKKDQEIKKI TKNPICRTKR 120 STTKDRHSKI CTSKGPRDRR MRLSLEIARS FFDLQDMLGF DKASKTVEWL FTKSRSAIKE 180 LKEKYFAGLP NCCNDAKSCD SKNNNLSVFE EVPREKKRRR KLRIVDKESR CKARARARER 240 TREKLILRLE KSKLDFEPNP IRVSNHCENK VVHLADSSMD MKASPAGLNG WN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	215	222	EKKRRRKL
2	216	221	KKRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	3e-31	TCP family protein