PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022150737.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 314aa    MW: 34681 Da    PI: 6.2573
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022150737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.6e-13108159155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  XP_022150737.1 108 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 159
                     79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MALEAVVYPQ DPLIYSGSKD LYSLFGGGIW SGGSFDFPEN QTENFPFGDW NSSSSVLAPS  60
PDAAISRNGL IFSDPNPPLE AESRTPNPVR PRRRRPKTRK NKEEIENQRM THIAVERNRR  120
KQMNEYLSVL RSLMPDSYVQ RGDQASIIGG AINFVKELEQ KVQFLSTAQM DSKGKNSEAS  180
SNSSSSSSSS SSSHIPFSEF FSFPQFSAME GCCSVGEGGT QCSSIADIEV TMVDNHANLK  240
IRSKRRPKQV LKMVAGLHSL SLSVLHLNIS TMDQIALYCL SVKVEDDCKL TSVDEIASAL  300
HQLLSRIEED SLMN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109120RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.18e-59bHLH family protein