PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151007.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 436aa MW: 47551.2 Da PI: 9.0877

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++v+++G g+W+++ r g++R++k+c++rw ++l XP_022151007.1 22 KGPWTAAEDAILMEYVRKHGEGNWNAVQRNSGLNRCGKSCRLRWANHL 69 79******************************************9986 PP
2	Myb_DNA-binding	48.8	1.7e-15	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ l++++++ +G++ W++ a+ ++ gRt++++k++w++ XP_022151007.1 75 KGAFSPEEERLILELHATYGNK-WARMAAQLP-GRTDNEIKNYWNT 118 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MTPSVGVATG SGGGSEVGGL KKGPWTAAED AILMEYVRKH GEGNWNAVQR NSGLNRCGKS 60 CRLRWANHLR PNLKKGAFSP EEERLILELH ATYGNKWARM AAQLPGRTDN EIKNYWNTRV 120 KRRQRQGLSL YPYNIKPSAA QSQPTTPTSP LPTTAPTTPT SSTPTTPTGC SGGGFFHFHS 180 PMHSLSPVTP PPHSPLSSPH GHPEHTFTSY PLLASNSFTF HRPPPILAAT PIQFKHFRNN 240 NNSNNINNIN SAGFSSHPCP VSISTPQIST TVLVHSPTVH SPTVHSPTVH SPTVPQLSRV 300 DSFQFPMTLS TSSPQILHTQ FKATDHGMIN MANCVGSVKQ ELPSAQLFHQ NDITHNNIGV 360 SSTMSFGGGG LLEDMLEEAQ ALACNLNSNN NKQNSSSCLV SHEEQRFFDG FNKLPDQDSN 420 PTECLFFGKH YLHSSK

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MTPSVGVATG SGGGSEVGGL KKGPWTAAED AILMEYVRKH GEGNWNAVQR NSGLNRCGKS  60
CRLRWANHLR PNLKKGAFSP EEERLILELH ATYGNKWARM AAQLPGRTDN EIKNYWNTRV  120
KRRQRQGLSL YPYNIKPSAA QSQPTTPTSP LPTTAPTTPT SSTPTTPTGC SGGGFFHFHS  180
PMHSLSPVTP PPHSPLSSPH GHPEHTFTSY PLLASNSFTF HRPPPILAAT PIQFKHFRNN  240
NNSNNINNIN SAGFSSHPCP VSISTPQIST TVLVHSPTVH SPTVHSPTVH SPTVPQLSRV  300
DSFQFPMTLS TSSPQILHTQ FKATDHGMIN MANCVGSVKQ ELPSAQLFHQ NDITHNNIGV  360
SSTMSFGGGG LLEDMLEEAQ ALACNLNSNN NKQNSSSCLV SHEEQRFFDG FNKLPDQDSN  420
PTECLFFGKH YLHSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	3e-68	MYB family protein