PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151051.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

YABBY

Protein Properties

Length: 201aa MW: 22299.6 Da PI: 7.382

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	190.3	9.3e-59	3	164	2	168
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 ++f+ +eq+CyvqC+ C+til+vsvP +sl++ vtv CGhC+sllsvn++ka+ + h+ s+ ++ +e + e ++ k ++ + s+ XP_022151051.1 3 HLFDLPEQICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLV---PLHFLSSIARNVPKESGGEMNSGKFLDSFKASNL--- 91 7899*****************************************99887643...3344456666677666666555555554444333... PP YABBY 97 sseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168 + ++ +++e +p +pp v++PP krqr+Psayn+fik+ei+r+ka+nP++sh+eaf +aaknWa fP+i XP_022151051.1 92 KFSEYEDDEGGLIPVTPPvVNKPPAKRQRAPSAYNCFIKNEIRRLKAQNPQMSHKEAFRTAAKNWANFPPIQQ 164 33344788888999988879***********************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MNHLFDLPEQ ICYVQCGICT TILLVSVPCS SLSMAVTVTC GHCSSLLSVN MMKATLVPLH 60 FLSSIARNVP KESGGEMNSG KFLDSFKASN LKFSEYEDDE GGLIPVTPPV VNKPPAKRQR 120 APSAYNCFIK NEIRRLKAQN PQMSHKEAFR TAAKNWANFP PIQQKEDAES CNQIEENGVW 180 DTQMPEVHND GKCSLRHSVL T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	4e-62	YABBY family protein