PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022151228.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HD-ZIP

Protein Properties

Length: 302aa MW: 34604.4 Da PI: 6.8761

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022151228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	7e-18	84	137	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_022151228.1 84 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 137 456899***********************************************9 PP
2	HD-ZIP_I/II	129.9	9.9e-42	83	175	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k++ne+L++++++L++e+++ XP_022151228.1 83 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKSDNEALKSQNQKLQAEIMA 175 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MTSNGMAFFP ANFMLQTSHE DHDHHHSSPP SLNPILPSCT PQDFHGVASF LGKRSMSFSG 60 AEMVEEGNNG EDEFSDDGSQ AGEKKRRLNM EQVKTLEKNF ELGNKLEPER KMQLARALGL 120 QPRQIAIWFQ NRRARWKTKQ LEKDYDLLKR QFEAIKSDNE ALKSQNQKLQ AEIMALKSRE 180 PTESINLNKE TEGSCSNRSE NSSDNIKLDI SRTPAIDSPH QHQHQHHQPT NRPLFPSSSL 240 RPPALAQLFQ TSSRSDPTKL ENHHNHNHNQ MPKEESSSLS NMFCGMDDHS GFWPWLEQQH 300 FN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	140	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-114	HD-ZIP family protein