PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151294.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB
Protein Properties Length: 277aa    MW: 31519.1 Da    PI: 5.6492
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-172370148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  l ++++ +G g+W+++ar  g++Rt+k+c++rw++yl
   XP_022151294.1 23 KGPWTAEEDSVLFNYIRSHGEGRWNAVARSTGLKRTGKSCRLRWLNYL 70
                     79********************************************97 PP
2Myb_DNA-binding46.96.2e-1576119146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022151294.1  76 RGNITLQEQLLILELHFRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 119
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MRGGFRSADS QMMKEEEEME VRKGPWTAEE DSVLFNYIRS HGEGRWNAVA RSTGLKRTGK  60
SCRLRWLNYL RPSVRRGNIT LQEQLLILEL HFRWGNRWSK IAQYLPGRTD NEIKNYWRTR  120
VQKQAKQLKC DVNSKQFRDT MRYVWIPRLL ERIQASTDTV AVAAATDPGQ PPHPLLDRTH  180
PSPSDSAWVN SHLAPATSSS DSGSDQVQPQ VSPVSDVTEN FNLVGIGEDH DGTVMLMEHS  240
CDGVAVNGWI GGGESLDDGF WDEEDLWFLQ QQFGDDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.17e-73MYB family protein