PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022151555.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C2H2
Protein Properties Length: 297aa    MW: 32982.1 Da    PI: 7.7006
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022151555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.42.9e-06136155120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++Cp C+k F+r  nL+ H+
  XP_022151555.1 136 FSCPLCSKAFNRYNNLQMHM 155
                     89*****************9 PP
2zf-C2H214.30.00012220242123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +C+k F  k + ++H +++
  XP_022151555.1 220 FTCRKCSKAFAVKGDWRTHEKNC 242
                     89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MTDPYSNFFT PNSFNFIPLH SESNPSLNFS LSHHSHSAAA HCRPPSPPPQ ALPLLNTLSP  60
ETADPSSTSC SFDDESALAL EISLSCPSSD LESHFSPEPA GKPDDADLSG HPLESSGKGQ  120
FWIPTPAQIL IGPTQFSCPL CSKAFNRYNN LQMHMWGHGS QYRKGPESLK GSQPTAMLRL  180
PCYCCAPGCK HNIDNPRSRP LKDFRTLQTH YKRKHGVKPF TCRKCSKAFA VKGDWRTHEK  240
NCGKIWYCFC GSDFKHKRSL KDHIKAFGRG HGALGLDYFE DDNEPASEVE HEGVVIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-115C2H2 family protein